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Escherichia coli APEC 01
  Query EcoAPECO1 Annotations in ERIC
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Other names N/A
Strain APEC O1
Serotype O1:H7:K1
Chromosome and Plasmid(s) Size 5,082,025 bp (chromosome); 241,387 bp (pAPEC-O1-R); 174,241 bp (pAPEC-O1-ColBM); 105,834 bp (pAPEC-O1-Cryp1); 46,870 bp (pAPEC-O1-Cryp2)
Genomic Sequence Status Sequencing complete
Assembly Status Final assembly (chromosome and 2 plasmids); finishing (2 plasmids)
Sequencing Center Iowa State University
Sequencing Center Contact(s) Dr. Lisa Nolan, Dr. Tim Johnson
Trace Files Status Availability unknown
Computational Annotation Status J Bacteriol 189(8), 3228-3236 (2007); Antimicrob Agents Chemother 50(11), 3929-3933 (2006); J Bacteriol 188(16), 5975-5983 (2006)
Manual Curation Status Long term curation plans unknown
GenBank/EMBL/DDBJ Entries CP000468 (chromosome); DQ381420 (pAPEC-O1-ColBM); DQ517526 (pAPEC-O1-R)
NCBI RefSeq Entries NC_008563 (chromosome)
Genome Trending


Feature Trending

This graph and associated table shows the trend in the number of features of this genome over a selected period of time.

To change the focus of the graph to a specific feature type select the appropriate name from the leftmost column in the table.

Use the links below to select the timeframe and period of the graph.

Timeframe: 6 months 1 year 2 years Period: 6 months 3 months 1 month

Feb 2006 Aug 2006 Feb 2007 Aug 2007 Feb 2008 Aug 2008
CDS 0 0 0 4,882 4,887 4,894
RBS 0 0 0 87 87 87
gene 0 0 0 88 88 88
is_element 0 0 0 48 48 48
misc_RNA 0 0 0 0 1 1
misc_feature 0 0 0 2 2 2
pseudogene 0 0 0 1 4 5
repeat_region 0 0 0 1 1 1
source 0 0 0 3 3 3
tRNA 0 0 0 94 94 94